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faq.renum_example [2018/10/18 14:40]
shogo [Repeatability model 2]
faq.renum_example [2018/10/18 14:42]
shogo [Random regression model]
Line 186: Line 186:
 <​file>​ <​file>​
 rrm.dat rrm.dat
 + 1 -1.00000 1.00000 -1.00000 1.00000 ​ 1 1 1 11
 + 2 -0.77778 0.40741 -0.00960 -0.29249 ​ 2 1 1 12
 + 3 -0.55556 -0.03704 0.40466 -0.36565 ​ 3 1 1 13
 + 4 -0.33333 -0.33333 0.40741 0.01235 ​ 4 2 1 13
 + 5 -0.11111 -0.48148 0.16324 0.32937 ​ 5 2 1 12
 + 6 0.11111 -0.48148 -0.16324 0.32937 ​ 6 2 1 11
 + 7 0.33333 -0.33333 -0.40741 0.01235 ​ 7 3 1 12
 + 8 0.55556 -0.03704 -0.40466 -0.36565 ​ 8 3 1 13
 + 9 0.77778 0.40741 0.00960 -0.29249 ​ 9 3 1 14
 + 10 1.00000 1.00000 1.00000 1.00000 ​ 10 3 1 15
 </​file>​ </​file>​
 <​file>​ <​file>​
 rrm.ped rrm.ped
 +1 0 0
 +2 0 0
 +3 0 0
 +4 0 0
 +5 1 0
 +6 1 4
 +7 2 0
 +8 2 4
 +9 2 0
 +10 3 5
 </​file>​ </​file>​
 +<​file>​
 +renf90.par
 +# BLUPF90 parameter file created by RENUMF90
 +DATAFILE
 + ​renf90.dat
 +NUMBER_OF_TRAITS
 +           1
 +NUMBER_OF_EFFECTS
 +           5
 +OBSERVATION(S)
 +    1
 +WEIGHT(S)
 + 
 +EFFECTS: POSITIONS_IN_DATAFILE NUMBER_OF_LEVELS TYPE_OF_EFFECT[EFFECT NESTED]
 + ​6 ​        3 cross 
 + ​2 ​        10 cov 7
 + ​3 ​        10 cov 7
 + ​4 ​        10 cov 7
 + ​5 ​        10 cov 7
 +RANDOM_RESIDUAL VALUES
 +       ​1.0000000
 + ​RANDOM_GROUP
 +     ​2 ​    ​3 ​    ​4 ​    5
 + ​RANDOM_TYPE
 + ​add_animal ​  
 + FILE
 +renadd02.ped ​                                               ​
 +(CO)VARIANCES
 +       ​1.0000000 ​      ​0.1000000 ​      ​0.1000000 ​      ​0.1000000
 +       ​0.1000000 ​      ​1.0000000 ​      ​0.1000000 ​      ​0.1000000
 +       ​0.1000000 ​      ​0.1000000 ​      ​1.0000000 ​      ​0.1000000
 +       ​0.1000000 ​      ​0.1000000 ​      ​0.1000000 ​      ​1.0000000
 +</​file>​
 +
 ===== Maternal effect model ===== ===== Maternal effect model =====
 <​file>​ <​file>​
faq.renum_example.txt ยท Last modified: 2018/10/18 15:51 by shogo