readme.pcg2hr
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| + | ====== BLUP90IOD2HR ====== | ||
| + | |||
| + | ===== Summary ===== | ||
| + | The AIREMLF90-type heterogeneous residual variance version of BLUP90IOD2. | ||
| + | \\ | ||
| + | See BLUP90IOD2 for other options. | ||
| + | \\ | ||
| + | See PREGSF90 with genotypes (SNP) for options. | ||
| + | \\ | ||
| + | |||
| + | ====== Options ====== | ||
| + | **Heterogeneous residual variances for a single trait** | ||
| + | < | ||
| + | OPTION hetres_pos 10 11 | ||
| + | </ | ||
| + | Specify the position of covariables. | ||
| + | < | ||
| + | OPTION hetres_pol 4.0 0.1 0.1 | ||
| + | </ | ||
| + | These values are on the natural log scale.\\ | ||
| + | |||
| + | **Heterogeneous residual variances for multiple traits**\\ | ||
| + | < | ||
| + | OPTION hetres_pos 10 10 11 11 | ||
| + | </ | ||
| + | or | ||
| + | < | ||
| + | OPTION hetres_pos 10 11 12 13 | ||
| + | </ | ||
| + | Specify the position of covariables (trait first). | ||
| + | "10 10" or "10 11" could be linear for first and second traits.\\ | ||
| + | "11 11" or "12 13" could be quadratic. | ||
| + | < | ||
| + | OPTION hetres_pol 4.0 4.0 0.1 0.1 0.01 0.01 | ||
| + | </ | ||
| + | \\ | ||