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readme.pregsf90 [2020/05/22 16:41]
dani [Quality Control (QC) for G]
readme.pregsf90 [2020/11/10 19:25] (current)
dani [Input files]
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 Useful for check for Mendelian conflicts and HWE (with also ''​OPTION sex_chr''​) and for GWAS (see ''​PostGSF90''​ program) Useful for check for Mendelian conflicts and HWE (with also ''​OPTION sex_chr''​) and for GWAS (see ''​PostGSF90''​ program)
  
-The //file// should ​has a header with the following column names:\\+The //file// should ​have a header with the following column names:\\
 //SNP_ID// - identification of the SNP (alphanumeric) \\ //SNP_ID// - identification of the SNP (alphanumeric) \\
 //CHR// - chromosome number (numeric), starting from 1 \\ //CHR// - chromosome number (numeric), starting from 1 \\
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-First SNP in the Map fiel corresponds to first SNP in genotype file, and so on.+The first SNP in the Map file corresponds to the first SNP in the genotype file, and so on.
  
-Other alphanumeric ​field are optionals.+Other alphanumeric ​fields ​are optional.
  
 If ''​OPTION saveCleanSNPs''​ is present fields are output. If ''​OPTION saveCleanSNPs''​ is present fields are output.
readme.pregsf90.1590165716.txt.gz ยท Last modified: 2020/05/22 16:41 by dani