Differences

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--- application_programs [2012/05/24 14:31] – shogo
+++ application_programs [2012/05/28 01:01] – ignacio
@@ Line 18: / Line 18: @@
   * THRGIBBSF90 - Gibbs sampling for any combination of categorical and linear traits (D. Lee)
   * THRGIBBS1F90 – as above but simplified with several options (S. Tsuruta)
-  * RENUMF90 - a renumbering program that also can check pedigrees and assign unknown parent groups; supports large data sets
+  * [[Readme.Renumf90|RENUMF90]] - a renumbering program that also can check pedigrees and assign unknown parent groups; supports large data sets
 Available by request
-  *   MRF90 - Method R program suitable for very large data sets; contact Tom Druet.
+  * MRF90 - Method R program suitable for very large data sets; contact T. Druet.
-  * COXF90 – Bayesian Cox model - contact Juan Pablo Sanchez  (JuanPablo.Sanchez@irta.cat)
+  * COXF90 – Bayesian Cox model - contact J. P. Sanchez (JuanPablo.Sanchez@irta.cat)
-  * BLUPF90HYP – BLUPF90 with hypothesis testing  (F  and Chi2 tests) -  contact Juan Pablo as above
+  * BLUPF90HYP – BLUPF90 with hypothesis testing (F and Chi2 tests) - contact J. P. Sanchez as above
 Available only under research agreement
-  *   BLUP90IOD - BLUP by iteration on data with support for very large problems (S. Tsuruta)
+  * BLUP90IOD2 - BLUP by iteration on data with support for very large models (S. Tsuruta)
-  *  BLUP90IODTHR - as above for threshold-linear models
+  * CBLUP90IOD - BLUP by iteration on data for threshold-linear models
-  * ACCF90 - approximation of multiple-trait accuracies
+  * BLUP90IODTHR - as above for threshold-linear models
-  * BLUP90ADJ - Data preadjustment tool
+  * ACCF90 - approximation of accuracies for breeding values
+  * BLUP90ADJ - data preadjustment tool
 Included in application programs
   *   [[readme.pregsf90|PREGSF90]] – genomic preprocessor that combines genomic and pedigree relationships (I. Aguilar)