application_programs
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application_programs [2018/06/20 20:23] – shogo | application_programs [2018/06/20 20:30] – shogo | ||
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* CBLUP90THR - as above but with thresholds computed and many linear traits (B. Auvray) | * CBLUP90THR - as above but with thresholds computed and many linear traits (B. Auvray) | ||
* CBLUP90REML - as above but with quasi REML (B. Auvray) - no genomic | * CBLUP90REML - as above but with quasi REML (B. Auvray) - no genomic | ||
- | * GIBBSF90 - simple block implementation of Gibbs sampling - no genomic | + | * [[readme.gibbs|GIBBSF90]] - simple block implementation of Gibbs sampling - no genomic |
* [[readme.gibbs1|GIBBS1F90]] - as above but faster for creating mixed model equations only once | * [[readme.gibbs1|GIBBS1F90]] - as above but faster for creating mixed model equations only once | ||
* [[readme.gibbs2|GIBBS2F90]] - as above but with joint sampling of correlated effects | * [[readme.gibbs2|GIBBS2F90]] - as above but with joint sampling of correlated effects | ||
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* PREDICTF90 - a program to calculate adjusted y, y_hat, and residuals (I. Aguilar) | * PREDICTF90 - a program to calculate adjusted y, y_hat, and residuals (I. Aguilar) | ||
* PREDF90 - a program to predict direct genomic value (DGV) for animals based on genotypes and SNP solution | * PREDF90 - a program to predict direct genomic value (DGV) for animals based on genotypes and SNP solution | ||
- | * BLUPF90TEST (new BLUPF90) - a combined program of blupf90, remlf90, and airemlf90: under test | + | * [[readme.blupf90new|BLUPF90TEST (new BLUPF90)]] - a combined program of blupf90, remlf90, and airemlf90: under test |
- | * GIBBSF90TEST (new GIBBSF90) - a combined program of gibbs2f90, gibbs3f90, thrgibbs1f90, | + | * [[readme.gibbsf90new|GIBBSF90TEST (new GIBBSF90)]] - a combined program of gibbs2f90, gibbs3f90, thrgibbs1f90, |
Available by request | Available by request |
application_programs.txt · Last modified: 2024/06/19 14:22 by andres