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application_programs [2022/05/10 21:24] daniapplication_programs [2022/10/03 11:45] dani
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 **Most** of the programs now support being called with the parameter file as an argument, e.g. <file> blupf90 renf90.par </file> This avoids typing the name of the file in interactive or doing the trick. <file> echo renf90.par | blupf90 </file> **Most** of the programs now support being called with the parameter file as an argument, e.g. <file> blupf90 renf90.par </file> This avoids typing the name of the file in interactive or doing the trick. <file> echo renf90.par | blupf90 </file>
  
-Download {{:blupf90_all7.pdf|BLUPF90 family manual}}. Note that some programs shown below are not in the manual (e.g. ''inbupgf90'')+Download {{:blupf90_all8.pdf|BLUPF90 family manual}}. Note that some programs shown below are not in the manual (e.g. ''inbupgf90'') 
 + 
 +\\ 
 +How to cite the BLUPF90 manual: 
 +Misztal I., Tsuruta S., Lourenco D.A.L., Aguilar I., Legarra A., and Vitezica Z. 2014. Manual for BLUPF90 family of programs. 
  
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   * [[readme.pregsf90|PREGSF90]] – genomic preprocessor that combines genomic and pedigree relationships (I. Aguilar)   * [[readme.pregsf90|PREGSF90]] – genomic preprocessor that combines genomic and pedigree relationships (I. Aguilar)
   * [[readme.pregsf90|POSTGSF90]] – genomic postprocessor that extracts SNP solutions after genomic evaluations (single step, GBLUP) (I. Aguilar)   * [[readme.pregsf90|POSTGSF90]] – genomic postprocessor that extracts SNP solutions after genomic evaluations (single step, GBLUP) (I. Aguilar)
-  * [[Readme.pedictf90|PREDICTF90]] - a program to calculate adjusted y, y_hat, and residuals (I. Aguilar)+  * [[Readme.predictf90|PREDICTF90]] - a program to calculate adjusted y, y_hat, and residuals (I. Aguilar)
   * [[Readme.predf90|PREDF90]] - a program to predict direct genomic value (DGV) for animals based on genotypes and SNP solution   * [[Readme.predf90|PREDF90]] - a program to predict direct genomic value (DGV) for animals based on genotypes and SNP solution
   * [[readme.qcf90|QCF90]] - a quality-control tool on genotypes and pedigree information (Y. Masuda)   * [[readme.qcf90|QCF90]] - a quality-control tool on genotypes and pedigree information (Y. Masuda)
application_programs.txt · Last modified: 2024/06/19 14:22 by andres

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