Differences

This shows you the differences between two versions of the page.

--- faq [2018/07/09 19:21] – [Genomic Analysis] shogo
+++ faq [2018/08/21 19:59] – [Gibbs sampler] shogo
@@ Line 28: / Line 28: @@
     * [[readme.thrgibbs1|thrgibbs1f90]]: Threshold + linear model
     * [[readme.thrgibbs3|thrgibbs3f90]]: Threshold + linear model with heterogeneous residual variances
+    * [[readme.gibbs|gibbsf90test]]: This is a beta version for a combined Gibbs program of gibbs2f90, gibbs3f90, thrgibbs1f90, and thrgibbs3f90
 ==== Post-Gibbs Analysis ====
@@ Line 35: / Line 36: @@
     * [[readme.blupf90|blupf90]]: (G)BLUP with SOR, FSPAK or PCG
+    * [[readme.predictf90|predictf90]]: Calculates y-hat
     * [[readme.pcg2|blup90iod2]]: (G)BLUP for a large number of equations (available only under some conditions)
     * [[readme.pcg2r|blup90iod2r]]: (G)BLUP with GIBBS3F90-type heterogeneous residual variance for a large number of equations (available only under some conditions)
@@ Line 40: / Line 42: @@
     * [[readme.thr1pcg|cblup90iod2]]: (G)BLUP with threshold + linear model for a large number of equations (available only under some conditions)
     * [[blup90mbe2]]: (G)BLUP for a large number of equations for multi-breed evaluations (available only under some conditions). The prior external EBV can be from other breeds, lines, foreign origins, ...
 ==== Accuracy (approximation) ====
@@ Line 50: / Line 51: @@
     * [[readme.pregsf90|preGSf90]]: Pre-analysis of genomic programs with options, including options for postGSf90 (GWAS)
     * [[readme.pregsf90|postGSf90]]: Post-analysis of genomic programs with options (GWAS)
-    * [[readme.predf90|predf90]]: Predict EBV with only SNP
+    * [[readme.predf90|predf90]]: Prediction of EBV using only SNP
 ==== Technical problems in Windows / Linux ====