| Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision |
| faq [2023/08/19 01:22] – [Individual program] shogo | faq [2023/12/20 23:21] – [Individual program] shogo |
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| * [[readme.reml|remlf90]]: EM algorithm | * [[readme.reml|remlf90]]: EM algorithm |
| * [[readme.aireml|airemlf90]]: Average Information REML + REMLF90 including heterogeneous residual variances [[http://nce.ads.uga.edu/html/projects/AI_SE_revised.pdf|Standard Errors (PDF)]] | * [[readme.aireml|airemlf90]]: Average Information REML + REMLF90 including heterogeneous residual variances [[http://nce.ads.uga.edu/html/projects/AI_SE_revised.pdf|Standard Errors (PDF)]] |
| | * [[FAQ.vc#I got weird messages and nonsense estimates in AI REML. What is it?|I got weird messages and nonsense estimates in AI REML. What is it?]] |
| * [[readme.blupf90plus|blupf90+]]: This is a combination of remlf90, airemlf90, and blupf90 | * [[readme.blupf90plus|blupf90+]]: This is a combination of remlf90, airemlf90, and blupf90 |
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| * [[readme.thr1pcg|cblup90iod2]]: (G)BLUP with threshold + linear model for a large number of equations (available only under some conditions) | * [[readme.thr1pcg|cblup90iod2]]: (G)BLUP with threshold + linear model for a large number of equations (available only under some conditions) |
| * [[blup90mbe2]]: (G)BLUP for a large number of equations for multi-breed evaluations (available only under some conditions). The prior external EBV can be from other breeds, lines, foreign origins, ... | * [[blup90mbe2]]: (G)BLUP for a large number of equations for multi-breed evaluations (available only under some conditions). The prior external EBV can be from other breeds, lines, foreign origins, ... |
| * [[blup90iod3]]: (G)BLUP for a large number of equations | * [[readme.pcgtest|blup90iod3 (new blup90iod)]] - a combined program of blup90iod2, blu90iodrr, blup90iod2hr, and blup90mbe with new features |
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| === Accuracy (approximation) === | === Accuracy (approximation) === |
| * [[readme.acc|accf90]]: Accuracy (reliability) for a large number of animals (available only under some conditions) | * [[readme.acc|accf90]]: Accuracy (reliability) for a large number of animals (available only under some conditions) |
| * [[readme.accgs|accf90GS]]: Accuracy (reliability) for a large number of animals with genotypes (available only under some conditions); requires options | * [[readme.accgs|accf90GS]]: Accuracy (reliability) for a large number of animals with genotypes (available only under some conditions); requires options |
| | * [[readme.accgs2|accf90GS2]]: New accuracy (reliability) for a large number of animals with genotypes (available only under some conditions); requires options |
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| === Genomic Analysis === | === Genomic Analysis === |
