faq
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faq [2023/12/20 23:27] – [Frequent mistakes in data, pedigree, and parameter files for BLUPF90 programs] shogo | faq [2023/12/20 23:32] – [Frequent mistakes in data, pedigree, and parameter files for BLUPF90 programs] shogo | ||
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* [[FAQ.vc#I got weird messages and nonsense estimates in AI REML. What is it?|I got weird messages and nonsense estimates in AI REML. What is it?]] | * [[FAQ.vc#I got weird messages and nonsense estimates in AI REML. What is it?|I got weird messages and nonsense estimates in AI REML. What is it?]] | ||
- | === Gibbs sampler | + | === Gibbs Sampler |
OPTIONs for priors and degrees of belief, for restarting from the last sampling, and for storing solutions and SD with or without fixed (known) variances | OPTIONs for priors and degrees of belief, for restarting from the last sampling, and for storing solutions and SD with or without fixed (known) variances | ||
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* [[readme.pregsf90|postGSf90]]: | * [[readme.pregsf90|postGSf90]]: | ||
* [[readme.predf90|predf90]]: | * [[readme.predf90|predf90]]: | ||
+ | * [[readme.qcf90|qcf90]] - a quality-control tool on genotypes and pedigree information | ||
+ | |||
+ | === Additional programs === | ||
+ | |||
+ | * [[Readme.Inbupgf90|inbupgf90]] - a program to calculate inbreeding coefficients with incomplete pedigree | ||
+ | * [[Readme.SeekParentf90|seekparentf90]] - a program to verify paternity and parent discovery using SNP markers | ||
faq.txt · Last modified: 2024/05/17 18:17 by dani