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--- faq [2023/12/28 22:37] – [FAQ: examples and options for BLUPF90 family programs] shogo
+++ faq [2024/01/09 02:56] – [Modelling] shogo
@@ Line 51: / Line 51: @@
     * [[readme.blupf90plus|blupf90+]]: This is a combination of remlf90, airemlf90, and blupf90
-    * [[readme.pcgtest|blup90iod3 (new blup90iod)]] - a combined program of blup90iod2, blu90iodrr, blup90iod2hr, and blup90mbe with new features
+    * [[readme.pcgtest|blup90iod3 (new blup90iod)]] - a combined program of blup90iod2, blu90iod2r, blup90iod2hr, and blup90mbe2 with new features
     * [[readme.thr1pcg|cblup90iod2]]: (G)BLUP with threshold + linear model for a large number of equations (available only under some conditions)
     * [[readme.predictf90|predictf90]]: Calculates y-hat
@@ Line 78: / Line 78: @@
     * [[Readme.Inbupgf90|inbupgf90]] - a program to calculate inbreeding coefficients with incomplete pedigree
     * [[Readme.SeekParentf90|seekparentf90]] -  a program to verify paternity and parent discovery using SNP markers
+==== Modelling ====
+    * Sire model
+         y = μ + ... + sire + e
+         y = μ + ... + sire + MGS + e
+    * Animal model
+       * Single record / animal
+         y = μ + ... + animal + e
+       * Multiple records / animal
+         y = μ + ... + animal + pe + e
+       * Random regressions
+         y = μ + ... + f(t1) + f(t2)*animal + f(t3)*pe + e
+    * Maternal effect model
+         y = μ + ... + animal + mat + mpe + e