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--- faq [2024/01/09 02:41] – [Frequent mistakes in data, pedigree, and parameter files for BLUPF90 programs] shogo
+++ faq [2024/01/09 03:23] – [Modeling] shogo
@@ Line 1: / Line 1: @@
-======  FAQ: examples, options, and tips for BLUPF90 family programs ======
+======  FAQ: examples, options, and tips for BLUPF90 family programs and modeling ======
 Download {{:blupf90_ALL8.pdf|BLUPF90 manual}}
@@ Line 80: / Line 80: @@
-==== Technical problems and segmentation fault ====
+===== Modeling =====
+<file>
-    * [[FAQ.segfault|Segmentation Fault]]: Received a message with "Segmentation fault"
+* Sire model (cg: contemporary group)
-    * [[FAQ.windows|System Error]]: Received a message like "The program can't start because libiomp5md.dll is missing..." in Windows.
+     y = μ + cg + ... + sire + e
-    * [[FAQ.openmp|Better settings for OpenMP]]: How should I define the number of threads used with a program?
+     y = μ + cg + ... + sire + MGS + e
-    * [[FAQ.intellibs|Installation of Intel Libraries]]: For users with customized programs
+     where cg = common environment: farm, year, season, management, ....
+* Animal model (pe: permanent environment)
+   * Single record / animal
+     y = μ + cg + ... + animal + e
+   * Multiple records / animal
+     y = μ + cg + ... + animal + pe + e
+   * Random regressions f(t)
+     y = μ + cg + ... + f(t1) + f(t2)*animal + f(t3)*pe + e
+     where f(t) = a function of t (t: continuous variable)
+* Maternal effect model (mpe: maternal permanent environment)
+     y = μ + cg + ... + animal + maternal + mpe + e
+</file>