User Tools

Site Tools


readme.aireml

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
Next revisionBoth sides next revision
readme.aireml [2014/06/06 15:37] – [Options] ignacioreadme.aireml [2014/06/06 15:39] – [Options] ignacio
Line 88: Line 88:
 ''R_trt1_trt1'': indicate the element of the residual (co)variance matrix for traits ''trt1'' and ''trt2'' ''R_trt1_trt1'': indicate the element of the residual (co)variance matrix for traits ''trt1'' and ''trt2''
  
-Example"+Several functions could be added, with one OPTION line per function. 
 + 
 +Examples:\\ 
 +\\
 ''OPTION se_covar_function P   G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1''\\ ''OPTION se_covar_function P   G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1''\\
 +
 ''OPTION se_covar_function H2d   G_2_2_1_1/(G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1)''\\ ''OPTION se_covar_function H2d   G_2_2_1_1/(G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1)''\\
 +
 ''OPTION se_covar_function H2t (G_2_2_1_1+1.5*G_2_3_1_1+0.5*G_3_3_1_1)/(G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1)''\\ ''OPTION se_covar_function H2t (G_2_2_1_1+1.5*G_2_3_1_1+0.5*G_3_3_1_1)/(G_2_2_1_1+G_2_3_1_1+G_3_3_1_1+G_4_4_1_1+R_1_1)''\\
-The first function calculates the SD for the total variance for a maternal model with permanent maternal effect, where 2 and 3 are the effect number for the direct and maternal additive genetic effects respectively, and 4 is the effect number for the maternal permanent random effect.    + 
-The second function calculates the heritability for the direct component and the third the total heritability. +The first function calculates the SD for the total variance for a maternal model with permanent maternal effect, where 2 and 3 are the effect number for the direct and maternal additive genetic effects respectively, and 4 is the effect number for the maternal permanent random effect. 
 +    
 +The second function calculates the heritability for the direct component and the third function the total heritability. 
  
 <file>OPTION samples_se_covar_function <n></file> <file>OPTION samples_se_covar_function <n></file>
readme.aireml.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1

Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki