readme.gibbs3
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readme.gibbs3 [2013/07/17 16:32] – shogo | readme.gibbs3 [2021/03/02 20:53] – [Running] shogo | ||
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</ | </ | ||
The position " | The position " | ||
+ | |||
< | < | ||
OPTION fixed_var all 1 2 3 | OPTION fixed_var all 1 2 3 | ||
</ | </ | ||
- | All solutions and posterior means and SD for effects for effects1, 2, and 3 are stored in " | + | All solutions and posterior means and SD for effects for effects1, 2, and 3 are stored in " |
< | < | ||
OPTION fixed_var mean 1 2 3 | OPTION fixed_var mean 1 2 3 | ||
</ | </ | ||
- | Posterior means and SD for effects1, 2, and 3 in " | + | Posterior means and SD for effects1, 2, and 3 in " |
+ | |||
+ | < | ||
+ | x11 x12 x13 | ||
+ | x21 x22 x23 | ||
+ | x31 x32 x33 | ||
+ | y11 y12 y13 | ||
+ | y21 y22 y23 | ||
+ | y31 y32 y33 | ||
+ | : | ||
+ | : | ||
+ | : | ||
+ | z11 z12 z13 | ||
+ | z21 z22 z23 | ||
+ | z31 z32 z33 | ||
+ | </ | ||
+ | When '' | ||
+ | Give residual covariances for each interval. | ||
+ | For example, in the above file, we assume a 3 trait-model and each covariance matrix is 3 x 3 (e.g., x, y, and z). | ||
+ | Note that the older version reads the variance components from the parameter file. | ||
+ | The current version reads the external file " | ||
< | < | ||
OPTION solution all 1 2 3 | OPTION solution all 1 2 3 | ||
</ | </ | ||
+ | Caution: this option will create a huge output solution file when you run many rounds and/or use a large model. | ||
All solutions and posterior means and SD for effects1, 2, and 3 are stored in " | All solutions and posterior means and SD for effects1, 2, and 3 are stored in " | ||
< | < | ||
Line 124: | Line 147: | ||
< | < | ||
name of parameter file?ex5 | name of parameter file?ex5 | ||
- | GIBBS2F90 | + | GIBBS3F90 |
| | ||
Data file: datasire | Data file: datasire |
readme.gibbs3.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1