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readme.pcg2 [2012/05/30 14:05] shogoreadme.pcg2 [2012/05/30 14:08] shogo
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 ===== Summary===== ===== Summary=====
-BLUP90IOD2 is a BLUP program for solving a large number of mixed model equations, using preconditioned conjugate gradient (PCG).+BLUP90IOD2 is a BLUP program for solving a large number of mixed model equations, using preconditioned conjugate gradient (PCG). Another version for heterogeneous residual variances is also available.
  
 ====== Options ====== ====== Options ======
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 Set the number of effects to be solved directly (default=0). Set the number of effects to be solved directly (default=0).
 <file> <file>
-OPTION solv_method 10+OPTION solv_method FSPAK
 </file> </file>
 Solving method for initial equations (default=DIRECT). Solving method for initial equations (default=DIRECT).
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 OPTION random_upg 1 2 OPTION random_upg 1 2
 </file> </file>
-Set the UPG random. "1" the weight for random UPG = 1. If the second number exits, the weight will be inverted (e.g., 1/2=0.5.+Set the UPG random. "1" the weight for random UPG = 1. If the second number exits, the weight will be inverted (e.g., 1/2=0.5).
 <file> <file>
 OPTION SNP_file snps OPTION SNP_file snps
readme.pcg2.txt · Last modified: 2024/05/16 14:16 by dani

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