readme.pcg2
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readme.pcg2 [2023/01/07 03:05] – [Options] shogo | readme.pcg2 [2024/05/15 19:48] – [Summary] dani | ||
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See PREGSF90 with genotypes (SNP) for options. | See PREGSF90 with genotypes (SNP) for options. | ||
\\ | \\ | ||
- | Implementation of one-step genomic | + | It implements single-step genomic |
//For information on availability of BLUP90IOD, please contact Ignacy Misztal (ignacy@uga.edu) or Daniela Lourenco (danilino@uga.edu) at the University of Georgia.// | //For information on availability of BLUP90IOD, please contact Ignacy Misztal (ignacy@uga.edu) or Daniela Lourenco (danilino@uga.edu) at the University of Georgia.// | ||
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OPTION conv_crit 1e-12 | OPTION conv_crit 1e-12 | ||
</ | </ | ||
- | Set a convergence criterion (default 1e-12). Usually, a stricter criterion (e.g., 1e-14 to 1e-16) is needed with a single-trait model than a multiple-start model. | + | Set a convergence criterion (default 1e-12). Usually, a stricter criterion (e.g., 1e-14 to 1e-16) is needed with a single-trait model than a multiple-trait model. |
< | < | ||
OPTION maxrounds 10000 | OPTION maxrounds 10000 | ||
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OPTION cont 1 | OPTION cont 1 | ||
</ | </ | ||
- | To restart the program from the last solutions (solutions_rsd). | + | To restart the program from the last solutions (required file: solutions_rsd). |
< | < | ||
OPTION missing -999 | OPTION missing -999 | ||
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OPTION restart 100 | OPTION restart 100 | ||
</ | </ | ||
- | Set the number of iteration | + | Set the number of iterations |
< | < | ||
OPTION prior_solutions | OPTION prior_solutions |
readme.pcg2.txt · Last modified: 2024/05/16 14:16 by dani