Differences

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--- readme.reml [2012/05/30 12:57] – shogo
+++ readme.reml [2013/07/17 16:24] – shogo
@@ Line 1: / Line 1: @@
 ====== REMLF90 ======
-Variance component estimation program with EM-REML algorithm.
 ===== Summary =====
+Variance component estimation program with EM-REML algorithm.
+See PREGSF90 with genotypes (SNP) for options. The final results will be saved in "REMLF90.log".
 ===== Options =====
@@ Line 27: / Line 27: @@
 ===== Does remlf90 always converge? =====
-Even when there is no variance, remlf90 will estimate a positive variance (in the parameter space), which will be determined by the starting value. If you are not sure if there is any variance, use a small starting value like 0.1 or 0.01. If the estimate does not change, probably there is no variance, so check your parameter file, model, and/or data again. If airemlf90 does not converge but remlf90 converges with the same data set, rerun remlf90 with a small starting value. The estimate could be artifact.
+Even when there is no variance, remlf90 will estimate a positive variance (within the parameter space), which will be determined by the starting value. If you are not sure if there is any variance, use a small starting value such as 0.1 or 0.01. If the estimate does not change, probably there is no variance, so check your parameter file, model, and/or data again. If airemlf90 does not converge but remlf90 converges with the same data set and the same model, rerun remlf90 with a small starting value because the estimate could be artifact.