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readme.renumf90 [2016/10/13 21:58] – [Fields in the parameter file] ignacio | readme.renumf90 [2016/10/13 21:58] – [Fields in the parameter file] ignacio |
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use of inbreeding coefficients to compute inb/upg code in the 4th column of the output pedigree file | use of inbreeding coefficients to compute inb/upg code in the 4th column of the output pedigree file |
* if inb_type is 'pedigree', the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID | * if inb_type is 'pedigree', the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID |
* if inb_type is 'file',the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs | * if inb_type is 'file',the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs |
<file> | <file> |
RANDOM_REGRESSION | RANDOM_REGRESSION |