Differences

This shows you the differences between two versions of the page.

--- readme.renumf90 [2016/10/13 21:58] – [Fields in the parameter file] ignacio
+++ readme.renumf90 [2016/11/04 21:17] – [Additive Pedigree File] shogo
@@ Line 212: / Line 212: @@
 optional\\
 use of inbreeding coefficients to compute inb/upg code in the 4th column of the output pedigree file
-  * if inb_type is 'pedigree', the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID
-* if inb_type is 'file',the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs
+//inb_type// could be:
+  * 'pedigree' - the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID
+  * 'file' - the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs
 <file>
 RANDOM_REGRESSION
@@ Line 336: / Line 339: @@
       if animal has genotype 10+number of know parents
 ) number of records
-) number of progenies (before elimination due to other effects) as parent 1
+) number of progeny (before elimination due to other effects) as parent 1
-) number of progenies (before elimination due to other effects) as parent 2
+) number of progeny (before elimination due to other effects) as parent 2
 ) original animal id