Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revision | Next revisionBoth sides next revision |
| readme.renumf90 [2023/03/02 01:15] – [Options] andres | readme.renumf90 [2023/03/02 01:18] – andres |
|---|
| //inb_type// could be: | //inb_type// could be: |
| * 'pedigree' - the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID | * 'pedigree' - the program computes inbreeding coefficients with Meuwissen and Luo (1992) using the pedigree to be saved in renaddxx.ped; calculated inbreeding coefficients will be saved in a file "renf90.inb" with the original ID |
| * 'file' - the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs | * 'file' - the program reads inbreeding coefficients from an external file. You should put the filename after 'file' e.g. 'file inbreeding.txt'. For instance a file "renf90.inb" (see above) from a previous run can be used. The file has at least 2 columns: original_ID and inbreeding value (from 0.0 to 1.0). The program just skips unnecessary IDs |
| * 'self x' - Calculates inbreeding with selfing, where x is the column in the pedigree file with the number of selfing generation | * 'self x' - Calculates inbreeding with selfing, where x is the column in the pedigree file with the number of selfing generation |
| * 'no-inbreeding' - turn inbreeding calculation off in RENUMF90 ≥ v1.157 | * 'no-inbreeding' - turn inbreeding calculation off in RENUMF90 ≥ v1.157 |
