readme.renumf90
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
readme.renumf90 [2023/03/02 01:18] – andres | readme.renumf90 [2023/06/12 16:47] – [Options] andres | ||
---|---|---|---|
Line 253: | Line 253: | ||
//r_type// could be: | //r_type// could be: | ||
* ' | * ' | ||
- | * " | + | * " |
< | < | ||
Line 262: | Line 262: | ||
* //r1-rq// specifies positions of covariables if r_type=' | * //r1-rq// specifies positions of covariables if r_type=' | ||
- | * //r1// is order of legendre polynomial and //r2// is position of covariable if r_type=' | + | * //r1// is order of legendre polynomial and //r2// is position of covariable if r_type=' |
< | < | ||
Line 346: | Line 346: | ||
</ | </ | ||
where //nn// is the number of fields. | where //nn// is the number of fields. | ||
+ | |||
+ | < | ||
+ | OPTION missing x | ||
+ | </ | ||
+ | |||
+ | allows indicating that missing value is the number x (e.g. 999) for instance if 0 is a valid record. | ||
+ | |||
+ | < | ||
+ | OPTION missing_in_weights | ||
+ | </ | ||
+ | |||
+ | in addition, this indicates that if a weight for the trait is 0, then the value of the trait is converted to " | ||
< | < | ||
Line 353: | Line 365: | ||
< | < | ||
- | OPTION inbreeding_method | + | OPTION inbreeding_method |
</ | </ | ||
Line 366: | Line 378: | ||
* 1: Meuwissen and Luo (1992) | * 1: Meuwissen and Luo (1992) | ||
- | the default is method 1, and speed-ups are made using method 6 but this requires using several threads (e.g. using '' | + | the default is method 1. Large speed-ups are made using method 6 but this requires using several threads (e.g. using '' |
The end of the parameter file for '' | The end of the parameter file for '' | ||
Line 404: | Line 416: | ||
2) parent 1 number or unknown parent group number for parent 1 | 2) parent 1 number or unknown parent group number for parent 1 | ||
3) parent 2 number or unknown parent group number for parent 2 | 3) parent 2 number or unknown parent group number for parent 2 | ||
- | 4) 3 minus number of known parents | + | 4) 3 minus number of known parents |
5) known or estimated year of birth (0 if not provided) | 5) known or estimated year of birth (0 if not provided) | ||
6) number of known parents (parents might be eliminated if not contributing; | 6) number of known parents (parents might be eliminated if not contributing; |
readme.renumf90.txt · Last modified: 2024/05/22 18:53 by dani