readme.thrgibbs1
Differences
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| Both sides previous revisionPrevious revision | Next revisionBoth sides next revision | ||
| readme.thrgibbs1 [2012/05/29 16:51] – shogo | readme.thrgibbs1 [2012/05/29 17:07] – shogo | ||
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| Line 18: | Line 18: | ||
| OPTION fixed_var all | OPTION fixed_var all | ||
| </ | </ | ||
| - | store all samples for solutions in " | + | Store all samples for solutions in " |
| < | < | ||
| OPTION fixed_var all 1 2 3 | OPTION fixed_var all 1 2 3 | ||
| </ | </ | ||
| - | store all samples for solutions in " | + | Store all samples for solutions in " |
| < | < | ||
| OPTION fixed_var mean | OPTION fixed_var mean | ||
| </ | </ | ||
| - | only posterior means and SD for solutions are calculated for all effects in " | + | Only posterior means and SD for solutions are calculated for all effects in " |
| < | < | ||
| OPTION fixed_var mean 1 2 3 | OPTION fixed_var mean 1 2 3 | ||
| - | only posterior means and SD for solutions are calculated for effects 1, 2, and 3 in " | + | Only posterior means and SD for solutions are calculated for effects 1, 2, and 3 in " |
| </ | </ | ||
| < | < | ||
| OPTION solution all | OPTION solution all | ||
| </ | </ | ||
| - | store all samples for solutions in " | + | Store all samples for solutions in " |
| < | < | ||
| OPTION solution all 1 2 3 | OPTION solution all 1 2 3 | ||
| </ | </ | ||
| - | store all samples for solutions in " | + | Store all samples for solutions in " |
| < | < | ||
| OPTION solution mean | OPTION solution mean | ||
| Line 46: | Line 46: | ||
| OPTION solution mean 1 2 3 | OPTION solution mean 1 2 3 | ||
| </ | </ | ||
| - | only posterior means and SD for solutions are calculated for effects 1, 2, and 3 in " | + | Only posterior means and SD for solutions are calculated for effects 1, 2, and 3 in " |
| < | < | ||
| OPTION cont 10000 | OPTION cont 10000 | ||
| Line 62: | Line 62: | ||
| OPTION thresholds 0.0 1.0 2.0 | OPTION thresholds 0.0 1.0 2.0 | ||
| </ | </ | ||
| - | set the fixed thresholds. No need to set 0 for binary traits. | + | Set the fixed thresholds. No need to set 0 for binary traits. |
| < | < | ||
| OPTION residual 1. | OPTION residual 1. | ||
| </ | </ | ||
| - | set the residual variance = 1. | + | Set the residual variance = 1. |
| < | < | ||
| OPTION censored xx. | OPTION censored xx. | ||
readme.thrgibbs1.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1