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==== Documentation and manual ==== | ==== Documentation and manual ==== | ||
- | BLUPF90 manual is available at {{:blupf90_ALL7.pdf|BLUPF90 manual}} | + | BLUPF90 manual is available at {{:blupf90_ALL8.pdf|BLUPF90 manual}} |
\\ | \\ | ||
* Click on [[FAQ]] to see which programs/ | * Click on [[FAQ]] to see which programs/ | ||
- | * The whole philosophy of the suite is in {{IMisztal.pdf}}. | + | * The whole philosophy of the suite is in {{IMisztal.pdf}}. |
* The detailed description and individual options of each program can be found in [[application_programs]]. | * The detailed description and individual options of each program can be found in [[application_programs]]. | ||
+ | |||
+ | \\ | ||
+ | :!: How to cite the BLUPF90 manual: | ||
+ | Misztal I., Tsuruta S., Lourenco D.A.L., Aguilar I., Legarra A., and Vitezica Z. 2014. Manual for BLUPF90 family of programs. | ||
==== Tutorial ==== | ==== Tutorial ==== | ||
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A tutorial of BLUPF90 programs is available as {{: | A tutorial of BLUPF90 programs is available as {{: | ||
\\ | \\ | ||
- | * Revised in September, 2019. | + | * Revised in September 2019. |
- | * This is an updated version of course note which we provided the participants in our Summer Course 2018. | + | * This is an updated version of the course note that we provided the participants in our Summer Course 2018. |
- | * The files used in this tutorial are available at Yutaka Masuda' | + | * The numerical examples |
+ | * The source files of this tutorial is also available on Github (https:// | ||
+ | |||
+ | |||
+ | Another more specific tutorial concerns the use of blupf90 software to analyze crosses using the theory of metafounders and SSGBLUP, and it is available at (http:// | ||
==== Legacy documentation ==== | ==== Legacy documentation ==== | ||
The following is the original documentation of our programs. The manual has the same information. | The following is the original documentation of our programs. The manual has the same information. | ||
- | - The main documentation | + | - The main documentation describes the parameter files, the use use of '' |
- The documentation on the variance component estimator '' | - The documentation on the variance component estimator '' | ||
- | - See course materials on genomic analyses. | + | - See course materials on genomic analyses. |
Those interested in programming can access [[http:// | Those interested in programming can access [[http:// | ||
The denseop, sparseop and fspak libraries have (outdated) {{denseop.pdf}} {{sparse90.pdf}} and {{fspak.pdf}} documentation. | The denseop, sparseop and fspak libraries have (outdated) {{denseop.pdf}} {{sparse90.pdf}} and {{fspak.pdf}} documentation. | ||
- | README' | + | READMEs |
documentation.txt · Last modified: 2024/05/17 18:11 by dani