faq.example
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faq.example [2012/05/29 21:11] – andres | faq.example [2024/03/25 18:22] (current) – external edit 127.0.0.1 | ||
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</ | </ | ||
- | **Random regression model** | + | **Random regression model 1** |
< | < | ||
DATAFILE | DATAFILE | ||
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0.1 0.1 0.1 0.1 0.1 1 | 0.1 0.1 0.1 0.1 0.1 1 | ||
</ | </ | ||
+ | **Random regression model 2** | ||
< | < | ||
DATAFILE | DATAFILE | ||
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< | < | ||
test.dat1: example data set using Legendre polynomial | test.dat1: example data set using Legendre polynomial | ||
- | 1 1 21.10000 12.10000 11 -1.73205 2.23607 | + | 1 1 21.10000 12.10000 11 -1.73205 2.23607 |
- | 2 2 22.20000 12.20000 12 -1.23718 .59324 | + | 2 2 22.20000 12.20000 12 -1.23718 .59324 |
- | 1 3 21.30000 12.30000 13 -.74231 -.50197 | + | 1 3 21.30000 12.30000 13 -.74231 -.50197 |
- | 2 1 22.10000 12.40000 14 -.24744 -1.04958 | + | 2 1 22.10000 12.40000 14 -.24744 -1.04958 |
- | 1 2 21.20000 12.10000 15 .24744 -1.04958 | + | 1 2 21.20000 12.10000 15 .24744 -1.04958 |
- | 2 3 22.30000 12.20000 16 .74231 -.50197 | + | 2 3 22.30000 12.20000 16 .74231 -.50197 |
- | 1 4 21.40000 12.30000 17 1.23718 .59324 | + | 1 4 21.40000 12.30000 17 1.23718 .59324 |
- | 2 5 22.50000 12.40000 18 1.73205 2.23607 | + | 2 5 22.50000 12.40000 18 1.73205 2.23607 |
</ | </ | ||
< | < | ||
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1 4 21.400000 12.300000 17 .000000 .250000 .750000 | 1 4 21.400000 12.300000 17 .000000 .250000 .750000 | ||
2 5 22.500000 12.400000 18 .000000 .000000 1.000000 | 2 5 22.500000 12.400000 18 .000000 .000000 1.000000 | ||
+ | </ | ||
+ | **Random regression model with different order** | ||
+ | < | ||
+ | DATAFILE | ||
+ | test.dat1 | ||
+ | NUMBER_OF_TRAITS | ||
+ | 2 | ||
+ | NUMBER_OF_EFFECTS | ||
+ | 8 | ||
+ | OBSERVATION(S) | ||
+ | 3 4 | ||
+ | WEIGHT(S) | ||
+ | EFFECTS: POSITIONS_IN_DATAFILE NUMBER_OF_LEVELS TYPE_OF_EFFECT [EFFECT NESTED] | ||
+ | 1 1 2 cross | ||
+ | 6 6 1 cov | ||
+ | 7 7 1 cov | ||
+ | 2 2 5 cross | ||
+ | 6 6 5 cov 2 2 | ||
+ | 7 7 5 cov 2 2 | ||
+ | 2 2 10 cross | ||
+ | 6 6 10 cov 2 2 | ||
+ | RANDOM_RESIDUAL VALUES | ||
+ | 10 1 | ||
+ | 1 5 | ||
+ | RANDOM_GROUP | ||
+ | 4 5 6 | ||
+ | RANDOM_TYPE | ||
+ | diagonal | ||
+ | FILE | ||
+ | |||
+ | (CO)VARIANCES | ||
+ | 1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 1 | ||
+ | RANDOM_GROUP | ||
+ | 7 8 | ||
+ | RANDOM_TYPE | ||
+ | add_animal | ||
+ | FILE | ||
+ | animal.ped | ||
+ | (CO)VARIANCES | ||
+ | 1 0.1 0.1 0.1 | ||
+ | 0.1 1 0.1 0.1 | ||
+ | 0.1 0.1 1 0.1 | ||
+ | 0.1 0.1 0.1 1 | ||
+ | </ | ||
+ | **Maternal Random regression model with different order** | ||
+ | < | ||
+ | DATAFILE | ||
+ | test.dat1 | ||
+ | NUMBER_OF_TRAITS | ||
+ | 2 | ||
+ | NUMBER_OF_EFFECTS | ||
+ | 10 | ||
+ | OBSERVATION(S) | ||
+ | 3 4 | ||
+ | WEIGHT(S) | ||
+ | EFFECTS: POSITIONS_IN_DATAFILE NUMBER_OF_LEVELS TYPE_OF_EFFECT [EFFECT NESTED] | ||
+ | 1 1 2 cross | ||
+ | 6 6 1 cov | ||
+ | 7 7 1 cov | ||
+ | 2 2 10 cross | ||
+ | 6 6 10 cov 2 2 | ||
+ | 7 7 10 cov 2 2 | ||
+ | 8 8 10 cross | ||
+ | 6 6 10 cov 8 8 | ||
+ | 8 8 10 cross | ||
+ | 6 6 10 cov 8 8 | ||
+ | RANDOM_RESIDUAL VALUES | ||
+ | 10 1 | ||
+ | 1 5 | ||
+ | RANDOM_GROUP | ||
+ | 4 5 6 7 8 | ||
+ | RANDOM_TYPE | ||
+ | add_animal | ||
+ | FILE | ||
+ | animal.ped | ||
+ | (CO)VARIANCES | ||
+ | 1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 1 0.1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 1 0.1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 1 0.1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 0.1 1 0.1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 0.1 0.1 1 0.1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 1 0.1 | ||
+ | 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 1 | ||
+ | RANDOM_GROUP | ||
+ | 9 10 | ||
+ | RANDOM_TYPE | ||
+ | diagonal | ||
+ | FILE | ||
+ | |||
+ | (CO)VARIANCES | ||
+ | 1 0.1 0.1 0.1 | ||
+ | 0.1 1 0.1 0.1 | ||
+ | 0.1 0.1 1 0.1 | ||
+ | 0.1 0.1 0.1 1 | ||
</ | </ | ||
**Random regression model with heterogeneous residual variances** | **Random regression model with heterogeneous residual variances** |
faq.example.1338325883.txt.gz · Last modified: 2024/03/25 18:22 (external edit)