how_to_continue_gibbs_sampling_from_an_accidental_stop
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| how_to_continue_gibbs_sampling_from_an_accidental_stop [2018/05/19 21:57] – yutaka | how_to_continue_gibbs_sampling_from_an_accidental_stop [2018/05/19 22:04] – yutaka | ||
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| ===== Methods ===== | ===== Methods ===== | ||
| + | |||
| + | In both methods, the continued sampling may give you slightly different results from the non-breaking run. | ||
| + | This is because of numerical error. | ||
| + | The saved samples of variance components have limited precision and it creates errors in subsequent sampling. | ||
| + | In general, this error is trivial and you can ignore it. | ||
| ==== Option for THRGIBBS1F90 ==== | ==== Option for THRGIBBS1F90 ==== | ||
| Line 56: | Line 61: | ||
| # Put your favorite value here. | # Put your favorite value here. | ||
| - | total_samples=50 | + | total_samples=100000 |
| # Save the intermediate samples every this rounds. | # Save the intermediate samples every this rounds. | ||
| - | save_rounds=10 | + | save_rounds=10000 |
| # set your parameter file | # set your parameter file | ||
| - | parameter_file=exmr99s | + | parameter_file=renf90.par |
| # thinning: samples saved in every n rounds | # thinning: samples saved in every n rounds | ||
how_to_continue_gibbs_sampling_from_an_accidental_stop.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1