how_to_run_pure_gblup
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| how_to_run_pure_gblup [2019/06/07 00:33] – yutaka | how_to_run_pure_gblup [2019/06/07 00:40] – yutaka | ||
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| The parameter file for renumf90 is as follows. | The parameter file for renumf90 is as follows. | ||
| - | It has three OPTIONs that changes | + | It has three OPTIONs that change |
| <file text renum.txt> | <file text renum.txt> | ||
| Line 145: | Line 145: | ||
| We call this adjustment //tuning// to obtain the final matrix. | We call this adjustment //tuning// to obtain the final matrix. | ||
| $$ | $$ | ||
| - | \mathbf{G}_{\mathrm{final}} | + | \mathbf{G}_{\mathrm{final}} |
| $$ | $$ | ||
| The constants $a$ and $b$ are tuning parameters. It is critical for genomic prediction when the genotyped animals are from only the last generation but you have the historical pedigree (i.e. incompatible $\mathbf{G}$ and $\mathbf{A}_{22}$). | The constants $a$ and $b$ are tuning parameters. It is critical for genomic prediction when the genotyped animals are from only the last generation but you have the historical pedigree (i.e. incompatible $\mathbf{G}$ and $\mathbf{A}_{22}$). | ||
how_to_run_pure_gblup.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1