Differences

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--- readme.acc [2014/08/28 14:53] – shogo
+++ readme.acc [2014/11/20 12:24] – shogo
@@ Line 1: / Line 1: @@
-====== ACCF90GS ======
+====== ACCF90 ======
 \\
 Approximate accuracy program for animal models with genotypes including maternal effect and sire models
 =====Summary=====
-ACCF90GS is a modified program of accf90 to calculate reliability for (G)EBV.
+ACCF90 is a program to calculate reliability for EBV.
-This is a beta version.
 =====Options=====
-<file>
-OPTION SNP_file snp
-</file>
-Specify the SNP file name to use genotype data.
 <file>
 OPTION acc_maxrounds 15
 </file>
-Maximum rounds (default 15). Usually, between 10 and 30.
+Maximum rounds (default 20). Usually, between 10 and 30.
 <file>
-OPTION conv_crit 1d-08
+OPTION conv_crit 1d-06
 </file>
-Convergence criterion (default 1d-08). 1d-05 or 1d-06 to no more than 1d-08.
+Convergence criterion (default 1d-06). 1d-05 or 1d-06 to no smaller than 1d-08.
 <file>
 OPTION cg 1 1 2 2
@@ Line 56: / Line 51: @@
 </file>
 Output parent averages (default no).
-<file>
-OPTION G_file GimA22i_ren.txt
-</file>
-Read a GimA22i file created by preGSf90. With this beta version, the text file "GimA22i_ren.txt" needs to be created by preGSf90 using "OPTION saveGimA22iRen" before running accf90GS.
-<file>
-OPTION rel 0.5
-</file>
-Rescale reliability if necessary