readme.blupf90
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| Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
| readme.blupf90 [2018/04/09 23:35] – [Options] shogo | readme.blupf90 [2022/05/05 22:34] – [Options] dani | ||
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| OPTION maxrounds 10000 | OPTION maxrounds 10000 | ||
| </ | </ | ||
| - | Set maximum number of rounds (default | + | Set maximum number of rounds (default |
| < | < | ||
| OPTION solv_method FSPAK | OPTION solv_method FSPAK | ||
| Line 42: | Line 42: | ||
| OPTION blksize 3 | OPTION blksize 3 | ||
| </ | </ | ||
| - | Set block size for preconditioner (default 1). | + | Set block size for preconditioner (default 1). It should be equal to the number of traits. |
| < | < | ||
| OPTION prior_solutions | OPTION prior_solutions | ||
| Line 64: | Line 64: | ||
| Specify the SNP file name to use genotype data. | Specify the SNP file name to use genotype data. | ||
| + | < | ||
| + | OPTION snp_p_value | ||
| + | </ | ||
| + | Computes the elements of the inverse of the Mixed Model Equations that are needed for exact GWAS with p-values using postGSf90. This requires quite a lot of memory and time. For details see https:// | ||
| ==== Omit A-inverse ==== | ==== Omit A-inverse ==== | ||
readme.blupf90.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1