BLUPF90

This is an old revision of the document!

---

The documentation for blupf90 is available separately as a PDF document. The following lines can be added at the end of parameter file for blupf90:

Available options:

OPTION conv_crit 1e-12

  Set convergence criteria (deault 1e-12).

OPTION maxrounds 10000

  Set maximum number of rounds (default 1000).

OPTION solv_method FSPAK

  Selection solutions by FSPAK, SOR or PCG (default PCG).

OPTION r_factor 1.6

  Set relaxation factor for SOR (default 1.4).

OPTION sol se

  Store solutions and s.e.

OPTION missing -999

  Missing observation (default 0).

OPTION residual

  y-hat and residual will be shown in yhat_residual.

OPTION blksize 3

  Set block size for preconditioner (default 1).

OPTION SNP_file snp

  Specify the SNP file name to use genotype data.