This is an old revision of the document!

BLUPF90

The documentation for blupf90 is available separately as a PDF document .

Options

OPTION conv_crit 1e-12

Set convergence criteria (deault 1e-12).

OPTION maxrounds 10000

Set maximum number of rounds (default 1000).

OPTION solv_method FSPAK

Selection solutions by FSPAK, SOR or PCG (default PCG).

OPTION r_factor 1.6

Set relaxation factor for SOR (default 1.4).

OPTION sol se

Store solutions and s.e.

OPTION missing -999

Missing observation (default 0).

OPTION residual

y-hat and residual will be shown in yhat_residual.

OPTION blksize 3

Set block size for preconditioner (default 1).

OPTION SNP_file snp

Specify the SNP file name to use genotype data.