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readme.gibbs2 [2012/08/17 15:09] – [Running] ignacioreadme.gibbs2 [2016/09/30 19:29] – [Running] andres
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 ====== GIBBS2F90 ====== ====== GIBBS2F90 ======
-\\ 
-Ignacy Misztal, University of Georgia, 3/7/2001 
  
 ===== Summary ===== ===== Summary =====
 +Ignacy Misztal, University of Georgia, 3/7/2001
 +\\
 Gibbs2f90 is a modification of gibbs1f90 to sample correlated effects jointly. This modification results in better mixing for models with correlated effects such as maternal or random-regression models. Memory requirements and CPU time per round are somewhat higher than in gibbs1f90. Gibbs2f90 is a modification of gibbs1f90 to sample correlated effects jointly. This modification results in better mixing for models with correlated effects such as maternal or random-regression models. Memory requirements and CPU time per round are somewhat higher than in gibbs1f90.
 +\\
 +See PREGSF90 with genotypes (SNP) for options.
  
 ===== Running ===== ===== Running =====
 +You can run as 
 +
 +<file>gibbs2f90 parameter_file --rounds 1000000 --burnin 10000 - -thin 10 --thinprint 10 </file>
 +
 +in which case you give the number of rounds, the burn-in, the storage of samples in the file ''gibbs_samples'', and the interval between printouts in the screen. Otherwise you can simply type ''gibbs1f90'' and you will be asked the parameter file and the questions below:
 +
 +
 number of samples and length of burn-in? number of samples and length of burn-in?
  
readme.gibbs2.txt · Last modified: 2024/03/25 18:22 by 127.0.0.1

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