readme.pcg2
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readme.pcg2 [2016/10/21 22:17] – [Options] shogo | readme.pcg2 [2019/05/28 19:23] – [Options] shogo | ||
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OPTION conv_crit 1e-12 | OPTION conv_crit 1e-12 | ||
</ | </ | ||
- | Set convergence | + | Set a convergence |
< | < | ||
OPTION maxrounds 10000 | OPTION maxrounds 10000 | ||
</ | </ | ||
- | Set maximum number of rounds (default | + | Set maximum number of rounds (default |
< | < | ||
OPTION blksize 3 | OPTION blksize 3 | ||
</ | </ | ||
- | Set block size for preconditioner (default 1). | + | Set a block size for preconditioner (default 1) to accelerate convergence (usually 2 to 5 times faster). For a multiple-trait model, the number can be the number of traits. |
< | < | ||
OPTION init_eq 10 | OPTION init_eq 10 | ||
</ | </ | ||
- | Set the number of effects to be solved directly (default=0). | + | Set the number of effects to be solved directly (default=0) to accelerate convergence (usually, 10% to 50% faster). |
< | < | ||
OPTION solv_method FSPAK | OPTION solv_method FSPAK | ||
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OPTION tol 1d-12 | OPTION tol 1d-12 | ||
</ | </ | ||
- | Tolerance to get a positive definite matrix (default=1d-12). | + | Tolerance to get a positive definite |
< | < | ||
OPTION residual | OPTION residual | ||
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OPTION avgeps 50 | OPTION avgeps 50 | ||
</ | </ | ||
- | Using the last 50 average eps for convergence. | + | Using the last 50 average eps for convergence, |
< | < | ||
OPTION cont 1 | OPTION cont 1 | ||
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\\ | \\ | ||
//For information on availability of BLUP90IOD, please contact Ignacy Misztal (ignacy@uga.edu) at the University of Georgia.// | //For information on availability of BLUP90IOD, please contact Ignacy Misztal (ignacy@uga.edu) at the University of Georgia.// | ||
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readme.pcg2.txt · Last modified: 2024/05/16 14:16 by dani