Differences

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--- readme.renumf90 [2020/04/21 07:05] – yutaka
+++ readme.renumf90 [2022/03/17 18:59] – andres
@@ Line 37: / Line 37: @@
 =====Fields in the parameter file=====
-# Parameter file for program renf90; it is translated to parameter
+# Parameter file for renumf90. It is translated into a parameter file for the BLUPF90 family of programs.
-# file for BLUPF90 family of programs.
 Lines with # are treated as comments
@@ Line 183: / Line 182: @@
 the default is 3
-all pedigrees are loaded if p=0.
+all pedigrees are loaded if p=0. To consider all ancestors to be traced back from genotyped and phenotyped animals, put a large number like 100. With p=0, RENUMF90 tries to include all animals found in the raw pedigree file even if the animals in the pedigree are not related to the animals with phenotype or genotype. Thus, p=0 is not recommended.
 <file>
@@ Line 284: / Line 284: @@
 ==== User-defined UPG code ====
-See [[undoc:renumf90|RENUMF90]] for detailed explanation.
+See [[undoc:renumf90|a separate documentation]] for details.
 The program accepts one of the following keywords in ''UPG_TYPE'': ''group'', ''group_unisex'', and ''group_sex''.