Differences

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--- faq.renum_example [2018/10/18 14:42] – [Random regression model] shogo
+++ faq.renum_example [2024/03/25 18:22] (current) – external edit 127.0.0.1
@@ Line 159: / Line 159: @@
 2
 </file>
-===== Random regression model =====
+===== Random regression model 1 =====
 <file>
 DATAFILE
@@ Line 173: / Line 173: @@
 EFFECT
 cross alpha
+EFFECT
+cov
+EFFECT
+cov
+EFFECT
+cov
+EFFECT
+cov
 EFFECT
 cross alpha
 RANDOM
 animal
+OPTIONAL
+pe
 FILE
 rrm.ped
@@ Line 196: / Line 206: @@
 0.77778 0.40741 0.00960 -0.29249  9 3 1 14
 1.00000 1.00000 1.00000 1.00000  10 3 1 15
+:
+:
+:
+:
+:
+:
 </file>
 <file>
@@ Line 212: / Line 228: @@
 <file>
 renf90.par
-# BLUPF90 parameter file created by RENUMF90
 DATAFILE
  renf90.dat
@@ Line 218: / Line 233: @@
 NUMBER_OF_EFFECTS
 OBSERVATION(S)
@@ Line 225: / Line 240: @@
 EFFECTS: POSITIONS_IN_DATAFILE NUMBER_OF_LEVELS TYPE_OF_EFFECT[EFFECT NESTED]
          3 cross
-         10 cov 7
+1 cov
-         10 cov 7
+1 cov
-         10 cov 7
+1 cov
-         10 cov 7
+1 cov
+         10 cov 11
+         10 cov 11
+         10 cov 11
+         10 cov 11
+         10 cov 11
+         10 cov 11
+         10 cov 11
+         10 cov 11
 RANDOM_RESIDUAL VALUES
 .0000000
  RANDOM_GROUP
-     3     4     5
+     7     8     9
  RANDOM_TYPE
  add_animal
  FILE
-renadd02.ped
+renadd06.ped
+(CO)VARIANCES
+.0000000       0.1000000       0.1000000       0.1000000
+.1000000       1.0000000       0.1000000       0.1000000
+.1000000       0.1000000       1.0000000       0.1000000
+.1000000       0.1000000       0.1000000       1.0000000
+ RANDOM_GROUP
+    11    12    13
+ RANDOM_TYPE
+ diagonal
+ FILE
 (CO)VARIANCES
 .0000000       0.1000000       0.1000000       0.1000000