BLUPF90

• How to fit haplotype effects
• User defined files for covariances of random effects
• Convert Illumina Final Report file into 0|1|2 marker file
• How to estimate different residual (co)variances by class in AIREMLF90 as in Gibbs3f90
• Covariance structure of correlated random effects for multiple traits
• How to continue Gibbs sampling from an accidental stop
• How to compute VanRaden's deregressed proof
• How to run pure GBLUP
• How to consider UPG in ssGBLUP
• The GSRU pseudo-code