BLUPF90 Genomics Workshop

EMBRAPA Campo Grande, Brazil

28 - 29 November 2017

Two-day course in genomic analyses with emphasis on single-step GBLUP

Taught by Daniela Lourenco and Shogo Tsuruta (University of Georgia, USA)

Instructions for setting up a VirtualBox and downloading files Setting up a VirtualBox

Editor Notepad++ npp.7.installer.zip

Outline

BLUPF90 Manual

Day 1

• Lab 1 files

• Introduction to renumf90

• Introduction to blupf90 and airemlf90

Day 2

• Introduction to preGSf90 - Quality control
• Introduction to preGSf90 - Matrices
• Introduction to postGSf90
• script for ssGWAS with iterations

• Lourenco et al., 2017

• Misztal et al., 2017

* All exercises