faq
This is an old revision of the document!
Table of Contents
FAQ for BLUPF90 programs
Input files
Data preparation program
Frequent mistakes in a parameter file for BLUPF90 programs
REML
Gibbs sampler
OPTIONs for priors and degrees of belief, for restarting from the last sampling, and for storing solutions and SD with or without fixed variances
- gibbs1f90: Faster than GIBBS2F90 without missing traits
- gibbs3f90: Heterogeneous residual variances
- thrgibbs1f90: Threshold model + linear model
Post-Gibbs Analysis
- postgibbsf90: Statistics and graphics for post-Gibbs analysis (use postgibbsold for old Gibbs sampler programs)
BLUP
- blupf90: BLUP with SOR, FSPAK or PCG
- blup90iod2: BLUP for a large number of equations (available only under some conditions)
- cblup90iod: BLUP with threshold model + linear model for a large number of equations (available only under some conditions)
Accuracy
- accf90: Accuracy (reliability) for a large number of animals (available only under some conditions)
Genomic Analysis
- PreGSF90: Pre-analysis of genomic programs
faq.1338213665.txt.gz · Last modified: 2024/03/25 18:22 (external edit)